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Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Microtus oregoni (creeping vole) ]

Gene ID: 121461100, updated on 22-Mar-2024

Summary

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Gene symbol
Tmtc3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Microtus oregoni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus
Orthologs
human mouse all
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Genomic context

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See Tmtc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Mior012 (GCF_018167655.1) Unplaced Scaffold NW_024543060.1 (80034343..80075022)

NW_024543060.1Genomic Context describing neighboring genes Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene KIT ligand Neighboring gene prostaglandin E synthase 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024543060 Unplaced Scaffold Reference Mior012

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microtus oregoni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mior012

Genomic

  1. NW_024543060.1 Reference Mior012

    Range
    80034343..80075022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041671878.1 → XP_041527812.1  protein O-mannosyl-transferase TMTC3 isoform X1

    Conserved Domains (2) summary
    TIGR02917
    Location:448 → 807
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:535 → 562
    TPR; TPR repeat [structural motif]

  2. XM_041671886.1 → XP_041527820.1  protein O-mannosyl-transferase TMTC3 isoform X2

    Conserved Domains (2) summary
    COG0457
    Location:422 → 636
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:535 → 562
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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