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LOC121390029 multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like [ Gigantopelta aegis ]

Gene ID: 121390029, updated on 17-Feb-2024

Summary

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Gene symbol
LOC121390029
Gene description
multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like
See related
EnsemblRapid:LOC121390029
Gene type
protein coding
RefSeq status
MODEL
Organism
Gigantopelta aegis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Neomphalina; Neomphalida; Neomphaloidea; Peltospiridae; Gigantopelta
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Genomic context

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See LOC121390029 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Gae_host_genome (GCF_016097555.1) 15 NC_054713.1 (15434757..15481172)

Chromosome 15 - NC_054713.1Genomic Context describing neighboring genes Neighboring gene caspase-2-like Neighboring gene guanine nucleotide-binding protein subunit beta Neighboring gene polyhomeotic-like protein 1 Neighboring gene uncharacterized LOC121390577

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054713.1 Chromosome 15 Reference Gae_host_genome

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gigantopelta aegis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gae_host_genome

Genomic

  1. NC_054713.1 Reference Gae_host_genome

    Range
    15434757..15481172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041521731.1 → XP_041377665.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like

    Related
    XP_041377665.1, XM_041521731.1
    Conserved Domains (1) summary
    smart00702
    Location:561 → 725
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

RNA

  1. XR_005960144.1 RNA Sequence

    Related
    XR_005960144.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases