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LOC121389785 chondroitin sulfate synthase 1-like [ Gigantopelta aegis ]

Gene ID: 121389785, updated on 17-Feb-2024

Summary

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Gene symbol
LOC121389785
Gene description
chondroitin sulfate synthase 1-like
See related
EnsemblRapid:LOC121389785
Gene type
protein coding
RefSeq status
MODEL
Organism
Gigantopelta aegis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Neomphalina; Neomphalida; Neomphaloidea; Peltospiridae; Gigantopelta
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Genomic context

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See LOC121389785 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Gae_host_genome (GCF_016097555.1) 15 NC_054713.1 (34718049..34721630, complement)

Chromosome 15 - NC_054713.1Genomic Context describing neighboring genes Neighboring gene deoxynucleoside kinase-like Neighboring gene uncharacterized LOC121389784 Neighboring gene chondroitin sulfate synthase 1-like Neighboring gene uncharacterized LOC121389787

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054713.1 Chromosome 15 Reference Gae_host_genome

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gigantopelta aegis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gae_host_genome

Genomic

  1. NC_054713.1 Reference Gae_host_genome

    Range
    34718049..34721630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041521434.1 → XP_041377368.1  chondroitin sulfate synthase 1-like

    Related
    XP_041377368.1, XM_041521434.1
    Conserved Domains (2) summary
    cl11394
    Location:611 → 662
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl21608
    Location:65 → 248
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases