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LOC121386451 chondroitin sulfate synthase 1-like [ Gigantopelta aegis ]

Gene ID: 121386451, updated on 17-Feb-2024

Summary

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Gene symbol
LOC121386451
Gene description
chondroitin sulfate synthase 1-like
See related
EnsemblRapid:LOC121386451
Gene type
protein coding
RefSeq status
MODEL
Organism
Gigantopelta aegis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Neomphalina; Neomphalida; Neomphaloidea; Peltospiridae; Gigantopelta
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Genomic context

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See LOC121386451 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Gae_host_genome (GCF_016097555.1) 12 NC_054710.1 (4184660..4199503)

Chromosome 12 - NC_054710.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121386580 Neighboring gene uncharacterized LOC121386399 Neighboring gene uncharacterized LOC121386581 Neighboring gene uncharacterized LOC121386669

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054710.1 Chromosome 12 Reference Gae_host_genome

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gigantopelta aegis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gae_host_genome

Genomic

  1. NC_054710.1 Reference Gae_host_genome

    Range
    4184660..4199503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041517350.1 → XP_041373284.1  chondroitin sulfate synthase 1-like

    Related
    XP_041373284.1, XM_041517350.1
    Conserved Domains (1) summary
    cl21608
    Location:69 → 267
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases