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HGFAC HGF activator [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121366017, updated on 3-Aug-2024

Summary

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Gene symbol
HGFAC
Gene description
HGF activator
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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See HGFAC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024508100.1 (4823731..4862986)

NW_024508100.1Genomic Context describing neighboring genes Neighboring gene Myb/SANT DNA binding domain containing 1 Neighboring gene regulator of G protein signaling 12 Neighboring gene docking protein 7 Neighboring gene LDL receptor related protein associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024508100 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zymogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatocyte growth factor activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024508100.1 Reference ASM1759013v1 Primary Assembly

    Range
    4823731..4862986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041458065.1 → XP_041313999.1  hepatocyte growth factor activator

    Conserved Domains (5) summary
    smart00059
    Location:43 → 89
    FN2; Fibronectin type 2 domain
    cd00054
    Location:98 → 134
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00061
    Location:137 → 176
    FN1; Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces ...
    cd00108
    Location:219 → 304
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    cd00190
    Location:340 → 576
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version

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