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SORBS3 sorbin and SH3 domain containing 3 [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121366014, updated on 3-Aug-2024

Summary

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Gene symbol
SORBS3
Gene description
sorbin and SH3 domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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See SORBS3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024510877.1 (1107769..1115377, complement)

NW_024510877.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C8orf58 homolog Neighboring gene PDZ and LIM domain 2 Neighboring gene protein phosphatase 3 catalytic subunit gamma Neighboring gene uncharacterized LOC121366015 Neighboring gene solute carrier family 39 member 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024510877 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: vinexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024510877.1 Reference ASM1759013v1 Primary Assembly

    Range
    1107769..1115377 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041490678.1 → XP_041346612.1  LOW QUALITY PROTEIN: vinexin

    Conserved Domains (6) summary
    smart00459
    Location:372 → 419
    Sorb; Sorbin homologous domain
    cd11918
    Location:876 → 933
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:610 → 664
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    PHA03247
    Location:40 → 354
    PHA03247; large tegument protein UL36; Provisional
    PRK14950
    Location:779 → 868
    PRK14950; DNA polymerase III subunits gamma and tau; Provisional
    cl17036
    Location:684 → 739
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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