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BMP1 bone morphogenetic protein 1 [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121366000, updated on 3-Aug-2024

Summary

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Gene symbol
BMP1
Gene description
bone morphogenetic protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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See BMP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024510877.1 (1195082..1217514, complement)

NW_024510877.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase III subunit D Neighboring gene phytanoyl-CoA 2-hydroxylase interacting protein Neighboring gene pulmonary surfactant-associated protein C-like Neighboring gene pulmonary surfactant-associated protein C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024510877 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bone morphogenetic protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024510877.1 Reference ASM1759013v1 Primary Assembly

    Range
    1195082..1217514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041490659.1 → XP_041346593.1  bone morphogenetic protein 1 isoform X1

    Conserved Domains (4) summary
    smart00179
    Location:535 → 576
    EGF_CA; Calcium-binding EGF-like domain
    cd00041
    Location:735 → 846
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd04281
    Location:114 → 308
    ZnMc_BMP1_TLD; Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, ...
    cl00057
    Location:673 → 727
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_041490660.1 → XP_041346594.1  bone morphogenetic protein 1 isoform X2

    Conserved Domains (3) summary
    smart00179
    Location:535 → 576
    EGF_CA; Calcium-binding EGF-like domain
    cd00041
    Location:423 → 533
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd04281
    Location:114 → 308
    ZnMc_BMP1_TLD; Zinc-dependent metalloprotease; BMP1/TLD-like subfamily. BMP1 (Bone morphogenetic protein 1) and TLD (tolloid)-like metalloproteases play vital roles in extracellular matrix formation, by cleaving precursor proteins such as enzymes, structural proteins, ...
Nucleotide Protein
Heading Accession and Version

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