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PDE9A phosphodiesterase 9A [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121364569, updated on 3-Aug-2024

Summary

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Gene symbol
PDE9A
Gene description
phosphodiesterase 9A
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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See PDE9A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024530488.1 (66184..117557)

NW_024530488.1Genomic Context describing neighboring genes Neighboring gene radial spoke head component 1 Neighboring gene solute carrier family 37 member 1 Neighboring gene WD repeat domain 4 Neighboring gene NADH:ubiquinone oxidoreductase subunit V3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024530488 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024530488.1 Reference ASM1759013v1 Primary Assembly

    Range
    66184..117557
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041487954.1 → XP_041343888.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    Conserved Domains (2) summary
    cd00077
    Location:252 → 425
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
    pfam11788
    Location:79 → 178
    MRP-L46; 39S mitochondrial ribosomal protein L46

  2. XM_041487953.1 → XP_041343887.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    Conserved Domains (1) summary
    cd00077
    Location:105 → 278
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
Nucleotide Protein
Heading Accession and Version

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