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LOC121359805 torsin-1A-interacting protein 1-like [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121359805, updated on 3-Aug-2024

Summary

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Gene symbol
LOC121359805
Gene description
torsin-1A-interacting protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
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Genomic context

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See LOC121359805 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024526266.1 (2778414..2792010)

NW_024526266.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene centrosomal protein 350 Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024526266 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024526266.1 Reference ASM1759013v1 Primary Assembly

    Range
    2778414..2792010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041479032.1 → XP_041334966.1  torsin-1A-interacting protein 1-like isoform X2

    Conserved Domains (1) summary
    COG5638
    Location:144 → 233
    COG5638; Uncharacterized conserved protein [Function unknown]

  2. XM_041479031.1 → XP_041334965.1  torsin-1A-interacting protein 1-like isoform X1

    Conserved Domains (1) summary
    COG5638
    Location:144 → 233
    COG5638; Uncharacterized conserved protein [Function unknown]
Nucleotide Protein
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