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GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121357232, updated on 3-Aug-2024

Summary

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Gene symbol
GALNT4
Gene description
polypeptide N-acetylgalactosaminyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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See GALNT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024524600.1 (4704007..4709044)

NW_024524600.1Genomic Context describing neighboring genes Neighboring gene epiphycan Neighboring gene collagen alpha-1(I) chain-like Neighboring gene ATPase plasma membrane Ca2+ transporting 1 Neighboring gene POC1 centriolar protein B Neighboring gene dual specificity phosphatase 6 Neighboring gene KIT ligand

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024524600 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024524600.1 Reference ASM1759013v1 Primary Assembly

    Range
    4704007..4709044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041474365.1 → XP_041330299.1  polypeptide N-acetylgalactosaminyltransferase 4

    Conserved Domains (2) summary
    cd02510
    Location:143 → 437
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:451 → 581
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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