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FADS1 fatty acid desaturase 1 [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

Gene ID: 121354751, updated on 3-Aug-2024

Summary

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Gene symbol
FADS1
Gene description
fatty acid desaturase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pyrgilauda ruficollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024523316.1 (219422..244878, complement)

NW_024523316.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA (8-3)-desaturase-like Neighboring gene acyl-CoA (8-3)-desaturase-like Neighboring gene fatty acid desaturase 2 Neighboring gene RAB3A interacting protein like 1 Neighboring gene bestrophin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024523316 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA (8-3)-desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759013v1 Primary Assembly

Genomic

  1. NW_024523316.1 Reference ASM1759013v1 Primary Assembly

    Range
    219422..244878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041469592.1 → XP_041325526.1  acyl-CoA (8-3)-desaturase isoform X2

    Conserved Domains (1) summary
    cd03506
    Location:98 → 349
    Delta6-FADS-like; The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases ...

  2. XM_041469591.1 → XP_041325525.1  acyl-CoA (8-3)-desaturase isoform X1

    Conserved Domains (2) summary
    PLN03199
    Location:12 → 437
    PLN03199; delta6-acyl-lipid desaturase-like protein; Provisional
    cd03506
    Location:159 → 410
    Delta6-FADS-like; The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases ...
Nucleotide Protein
Heading Accession and Version

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