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SGMS2 sphingomyelin synthase 2 [ Onychostruthus taczanowskii (white-rumped snowfinch) ]

Gene ID: 121348414, updated on 3-Aug-2024

Summary

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Gene symbol
SGMS2
Gene description
sphingomyelin synthase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostruthus taczanowskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus
Orthologs
human mouse all
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Genomic context

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See SGMS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1759005v1 (GCF_017590055.1) Unplaced Scaffold NW_024498351.1 (581960..617177)

NW_024498351.1Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 2 Neighboring gene 3'-phosphoadenosine 5'-phosphosulfate synthase 1 Neighboring gene cytochrome P450 2U1 Neighboring gene hydroxyacyl-CoA dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024498351 Unplaced Scaffold Reference ASM1759005v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine:ceramide cholinephosphotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onychostruthus taczanowskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759005v1 Primary Assembly

Genomic

  1. NW_024498351.1 Reference ASM1759005v1 Primary Assembly

    Range
    581960..617177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041427899.1 → XP_041283833.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    Conserved Domains (1) summary
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal

  2. XM_041427897.1 → XP_041283831.1  phosphatidylcholine:ceramide cholinephosphotransferase 2

    Conserved Domains (1) summary
    pfam14360
    Location:220 → 293
    PAP2_C; PAP2 superfamily C-terminal
Nucleotide Protein
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