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SGCA sarcoglycan alpha [ Onychostruthus taczanowskii (white-rumped snowfinch) ]

Gene ID: 121347564, updated on 3-Aug-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostruthus taczanowskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1759005v1 (GCF_017590055.1) Unplaced Scaffold NW_024507105.1 (368131..373437)

NW_024507105.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase kinase 2 Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene collagen type I alpha 1 chain Neighboring gene all-trans-retinol 13,14-reductase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024507105 Unplaced Scaffold Reference ASM1759005v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onychostruthus taczanowskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759005v1 Primary Assembly

Genomic

  1. NW_024507105.1 Reference ASM1759005v1 Primary Assembly

    Range
    368131..373437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041426279.1 → XP_041282213.1  alpha-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam05510
    Location:35 → 359
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_041426280.1 → XP_041282214.1  alpha-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam05510
    Location:35 → 359
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  3. XM_041426281.1 → XP_041282215.1  alpha-sarcoglycan isoform X3

    Conserved Domains (1) summary
    pfam05510
    Location:35 → 357
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  4. XM_041426282.1 → XP_041282216.1  alpha-sarcoglycan isoform X4

    Conserved Domains (1) summary
    pfam05510
    Location:67 → 288
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

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