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ALKBH8 alkB homolog 8, tRNA methyltransferase [ Onychostruthus taczanowskii (white-rumped snowfinch) ]

Gene ID: 121341289, updated on 3-Aug-2024

Summary

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Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostruthus taczanowskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus
Orthologs
human mouse all
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Genomic context

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See ALKBH8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1759005v1 (GCF_017590055.1) Unplaced Scaffold NW_024497078.1 (1539368..1583907)

NW_024497078.1Genomic Context describing neighboring genes Neighboring gene sarcolipin Neighboring gene ELMO domain containing 1 Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene vitelline membrane outer layer protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024497078 Unplaced Scaffold Reference ASM1759005v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onychostruthus taczanowskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759005v1 Primary Assembly

Genomic

  1. NW_024497078.1 Reference ASM1759005v1 Primary Assembly

    Range
    1539368..1583907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041414698.1 → XP_041270632.1  alkylated DNA repair protein alkB homolog 8

    Conserved Domains (3) summary
    PRK08317
    Location:412 → 507
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:52 → 106
    RRM; RNA recognition motif
    cl21496
    Location:135 → 305
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  2. XM_041414715.1 → XP_041270649.1  alkylated DNA repair protein alkB homolog 8

    Conserved Domains (3) summary
    PRK08317
    Location:412 → 507
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:52 → 106
    RRM; RNA recognition motif
    cl21496
    Location:135 → 305
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  3. XM_041414707.1 → XP_041270641.1  alkylated DNA repair protein alkB homolog 8

    Conserved Domains (3) summary
    PRK08317
    Location:412 → 507
    PRK08317; hypothetical protein; Provisional
    smart00360
    Location:52 → 106
    RRM; RNA recognition motif
    cl21496
    Location:135 → 305
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
Heading Accession and Version

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