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CLEC16A C-type lectin domain containing 16A [ Onychostruthus taczanowskii (white-rumped snowfinch) ]

Gene ID: 121334458, updated on 3-Aug-2024

Summary

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Gene symbol
CLEC16A
Gene description
C-type lectin domain containing 16A
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostruthus taczanowskii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus
Orthologs
human mouse all
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Genomic context

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See CLEC16A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ASM1759005v1 (GCF_017590055.1) Unplaced Scaffold NW_024499128.1 (3662297..3725644)

NW_024499128.1Genomic Context describing neighboring genes Neighboring gene class II major histocompatibility complex transactivator Neighboring gene Dexi homolog Neighboring gene suppressor of cytokine signaling 1 Neighboring gene RecQ mediated genome instability 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024499128 Unplaced Scaffold Reference ASM1759005v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endolysosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLEC16A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onychostruthus taczanowskii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1759005v1 Primary Assembly

Genomic

  1. NW_024499128.1 Reference ASM1759005v1 Primary Assembly

    Range
    3662297..3725644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041401623.1 → XP_041257557.1  protein CLEC16A isoform X2

  2. XM_041401631.1 → XP_041257565.1  protein CLEC16A isoform X8

  3. XM_041401622.1 → XP_041257556.1  protein CLEC16A isoform X1

  4. XM_041401621.1 → XP_041257555.1  protein CLEC16A isoform X1

  5. XM_041401627.1 → XP_041257561.1  protein CLEC16A isoform X4

  6. XM_041401625.1 → XP_041257559.1  protein CLEC16A isoform X3

  7. XM_041401630.1 → XP_041257564.1  protein CLEC16A isoform X7

  8. XM_041401624.1 → XP_041257558.1  protein CLEC16A isoform X2

  9. XM_041401628.1 → XP_041257562.1  protein CLEC16A isoform X5

  10. XM_041401629.1 → XP_041257563.1  protein CLEC16A isoform X6

Nucleotide Protein
Heading Accession and Version

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