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LOC121328612 mitochondrial carnitine/acylcarnitine carrier protein-like [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121328612, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121328612
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
See related
EnsemblRapid:ENSPAHG00005013452
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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Genomic context

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See LOC121328612 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 16 NC_054549.1 (38757440..38767197, complement)

Chromosome 16 - NC_054549.1Genomic Context describing neighboring genes Neighboring gene inositol hexakisphosphate kinase 2-like Neighboring gene cAMP-dependent protein kinase type II-alpha regulatory subunit-like Neighboring gene E3 ubiquitin-protein ligase ARIH2-like Neighboring gene inosine-5'-monophosphate dehydrogenase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054549.1 Chromosome 16 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054549.1 Reference ASM1765450v1 Primary Assembly

    Range
    38757440..38767197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041273449.1 → XP_041129383.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    Related
    ENSPAHP00005019227.1, ENSPAHT00005020464.1
    Conserved Domains (1) summary
    PTZ00169
    Location:3 → 288
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_041273451.1 → XP_041129385.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X2

    Related
    ENSPAHP00005019216.1, ENSPAHT00005020453.1
    Conserved Domains (1) summary
    PTZ00169
    Location:3 → 276
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  3. XM_041273452.1 → XP_041129386.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X3

    Conserved Domains (1) summary
    PTZ00169
    Location:3 → 208
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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