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LOC121322782 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121322782, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121322782
Gene description
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
See related
EnsemblRapid:ENSPAHG00005003170
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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Genomic context

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See LOC121322782 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 1 NC_054534.1 (78027565..78079260, complement)

Chromosome 1 - NC_054534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121299700 Neighboring gene uncharacterized LOC121299736 Neighboring gene EF-hand calcium-binding domain-containing protein 14-like Neighboring gene annexin A10-like Neighboring gene testican-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054534.1 Chromosome 1 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054534.1 Reference ASM1765450v1 Primary Assembly

    Range
    78027565..78079260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041263094.1 → XP_041119028.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X3

    Conserved Domains (1) summary
    cl10013
    Location:22 → 442
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_041263080.1 → XP_041119014.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X1

    Conserved Domains (1) summary
    cl10013
    Location:22 → 478
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  3. XM_041263086.1 → XP_041119020.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X2

    Related
    ENSPAHP00005004742.1, ENSPAHT00005004923.1
    Conserved Domains (1) summary
    cl10013
    Location:22 → 478
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version

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