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LOC121321479 acetylcholine receptor subunit alpha [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121321479, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121321479
Gene description
acetylcholine receptor subunit alpha
See related
EnsemblRapid:ENSPAHG00005030469
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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Genomic context

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See LOC121321479 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 10 NC_054543.1 (36249339..36266614)

Chromosome 10 - NC_054543.1Genomic Context describing neighboring genes Neighboring gene cyclic AMP-dependent transcription factor ATF-2-like Neighboring gene chimerin 1 Neighboring gene WAS/WASL-interacting protein family member 1-like Neighboring gene integral membrane protein GPR155-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054543.1 Chromosome 10 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054543.1 Reference ASM1765450v1 Primary Assembly

    Range
    36249339..36266614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041260446.1 → XP_041116380.1  acetylcholine receptor subunit alpha

    Related
    ENSPAHP00005040782.1, ENSPAHT00005045453.1
    Conserved Domains (2) summary
    TIGR00860
    Location:4 → 450
    LIC; Cation transporter family protein
    cd19014
    Location:26 → 234
    LGIC_ECD_nAChR_A1; extracellular domain of nicotinic acetylcholine receptor subunit alpha 1 (CHRNA1)
Nucleotide Protein
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