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LOC121316914 mediator of RNA polymerase II transcription subunit 23 [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121316914, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121316914
Gene description
mediator of RNA polymerase II transcription subunit 23
See related
EnsemblRapid:ENSPAHG00005030241
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
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Genomic context

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See LOC121316914 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
30
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 6 NC_054539.1 (15971937..16004365)

Chromosome 6 - NC_054539.1Genomic Context describing neighboring genes Neighboring gene interleukin-20 receptor subunit alpha-like Neighboring gene interleukin-22 receptor subunit alpha-2-like Neighboring gene A-kinase anchor protein 7-like Neighboring gene protein 4.1-like Neighboring gene uncharacterized LOC121316918

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054539.1 Chromosome 6 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054539.1 Reference ASM1765450v1 Primary Assembly

    Range
    15971937..16004365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041252264.1 → XP_041108198.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

    Related
    ENSPAHP00005040703.1, ENSPAHT00005045354.1

  2. XM_041252265.1 → XP_041108199.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

    Related
    ENSPAHP00005040715.1, ENSPAHT00005045370.1
Nucleotide Protein
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