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LOC121120463 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like [ Lepeophtheirus salmonis (salmon louse) ]

Gene ID: 121120463, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121120463
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
See related
EnsemblRapid:LOC121120463
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepeophtheirus salmonis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Siphonostomatoida; Caligidae; Lepeophtheirus
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Genomic context

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See LOC121120463 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current UVic_Lsal_1.1 (GCF_016086655.2) 6 NC_052136.1 (37143761..37145614, complement)

Chromosome 6 - NC_052136.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121119573 Neighboring gene alpha-mannosidase 2-like Neighboring gene sec1 family domain containing Slh Neighboring gene uncharacterized LOC121120169

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052136.1 Chromosome 6 Reference UVic_Lsal_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
Names
TGFbetaactivated kinase 1 and MAP3K7binding protein 1like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepeophtheirus salmonis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UVic_Lsal_1.1 Primary Assembly

Genomic

  1. NC_052136.1 Reference UVic_Lsal_1.1 Primary Assembly

    Range
    37143761..37145614 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040715338.1 → XP_040571272.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

    UniProtKB/TrEMBL
    A0A0K2SX55
    Related
    XP_040571272.1, XM_040715338.1
    Conserved Domains (1) summary
    cd00143
    Location:34 → 338
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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