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PARVA parvin alpha [ Falco naumanni (lesser kestrel) ]

Gene ID: 121094721, updated on 3-Aug-2024

Summary

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Gene symbol
PARVA
Gene description
parvin alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco naumanni
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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See PARVA in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
100 current bFalNau1.pat (GCF_017639655.1) 10 NC_054063.1 (9960983..10029828)

Chromosome 10 - NC_054063.1Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 3 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2 Neighboring gene TEA domain transcription factor 1 Neighboring gene Ras association domain family member 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054063.1 Chromosome 10 Reference bFalNau1.pat Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-parvin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Falco naumanni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalNau1.pat Primary Assembly

Genomic

  1. NC_054063.1 Reference bFalNau1.pat Primary Assembly

    Range
    9960983..10029828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040608715.1 → XP_040464649.1  alpha-parvin isoform X2

    Conserved Domains (2) summary
    cd21335
    Location:91 → 205
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:244 → 372
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin

  2. XM_040608714.1 → XP_040464648.1  alpha-parvin isoform X1

    Conserved Domains (2) summary
    cd21335
    Location:127 → 241
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:280 → 408
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin

  3. XM_040608719.1 → XP_040464653.1  alpha-parvin isoform X4

    Conserved Domains (2) summary
    cd21335
    Location:18 → 132
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:171 → 299
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin

  4. XM_040608718.1 → XP_040464652.1  alpha-parvin isoform X4

    Conserved Domains (2) summary
    cd21335
    Location:18 → 132
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:171 → 299
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin

  5. XM_040608716.1 → XP_040464650.1  alpha-parvin isoform X3

    Conserved Domains (2) summary
    cd21335
    Location:56 → 170
    CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
    cd21337
    Location:209 → 337
    CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin
Nucleotide Protein
Heading Accession and Version

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