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HOOK2 hook microtubule tethering protein 2 [ Puma yagouaroundi (jaguarundi) ]

Gene ID: 121014039, updated on 22-Mar-2024

Summary

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Gene symbol
HOOK2
Gene description
hook microtubule tethering protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma yagouaroundi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See HOOK2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current PumYag (GCF_014898765.1) Unplaced Scaffold NW_024412431.1 (3985896..4002210, complement)

NW_024412431.1Genomic Context describing neighboring genes Neighboring gene guided entry of tail-anchored proteins factor 3, ATPase Neighboring gene bestrophin 2 Neighboring gene uncharacterized LOC121014040 Neighboring gene JunB proto-oncogene, AP-1 transcription factor subunit Neighboring gene peroxiredoxin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024412431 Unplaced Scaffold Reference PumYag Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein Hook homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma yagouaroundi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumYag Primary Assembly

Genomic

  1. NW_024412431.1 Reference PumYag Primary Assembly

    Range
    3985896..4002210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040450042.1 → XP_040305976.1  protein Hook homolog 2 isoform X6

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 702
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  2. XM_040450041.1 → XP_040305975.1  protein Hook homolog 2 isoform X5

    Conserved Domains (1) summary
    COG1196
    Location:254 → 615
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. XM_040450040.1 → XP_040305974.1  protein Hook homolog 2 isoform X4

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 710
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  4. XM_040450039.1 → XP_040305973.1  protein Hook homolog 2 isoform X3

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 711
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  5. XM_040450037.1 → XP_040305971.1  protein Hook homolog 2 isoform X2

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 712
    HOOK; HOOK protein
    cd22227
    Location:7 → 156
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  6. XM_040450036.1 → XP_040305970.1  protein Hook homolog 2 isoform X1

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 776
    HOOK; HOOK protein
    pfam19047
    Location:7 → 157
    HOOK_N; HOOK domain

  7. XM_040450045.1 → XP_040305979.1  protein Hook homolog 2 isoform X9

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 553
    HOOK; HOOK protein
    pfam19047
    Location:7 → 157
    HOOK_N; HOOK domain

  8. XM_040450044.1 → XP_040305978.1  protein Hook homolog 2 isoform X8

    Conserved Domains (1) summary
    TIGR02168
    Location:180 → 508
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  9. XM_040450043.1 → XP_040305977.1  protein Hook homolog 2 isoform X7

    Conserved Domains (2) summary
    pfam05622
    Location:179 → 555
    HOOK; HOOK protein
    pfam19047
    Location:7 → 157
    HOOK_N; HOOK domain
Nucleotide Protein
Heading Accession and Version

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