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SGCD sarcoglycan delta [ Puma yagouaroundi (jaguarundi) ]

Gene ID: 121009757, updated on 22-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma yagouaroundi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current PumYag (GCF_014898765.1) Unplaced Scaffold NW_024412377.1 (47460229..48404429)

NW_024412377.1Genomic Context describing neighboring genes Neighboring gene methylosome subunit pICln-like Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene uncharacterized LOC121009772 Neighboring gene U2 spliceosomal RNA Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene hepatitis A virus cellular receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024412377 Unplaced Scaffold Reference PumYag Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma yagouaroundi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumYag Primary Assembly

Genomic

  1. NW_024412377.1 Reference PumYag Primary Assembly

    Range
    47460229..48404429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040443049.1 → XP_040298983.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_040443057.1 → XP_040298991.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_040443063.1 → XP_040298997.1  delta-sarcoglycan isoform X2

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 236
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  4. XM_040443038.1 → XP_040298972.1  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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