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UBXN2B UBX domain protein 2B [ Bufo bufo (common toad) ]

Gene ID: 121001230, updated on 22-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
EnsemblRapid:ENSBBFG00005018653
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo bufo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aBufBuf1.1 (GCF_905171765.1) 5 NC_053393.1 (127176865..127221547, complement)

Chromosome 5 - NC_053393.1Genomic Context describing neighboring genes Neighboring gene DNA damage-regulated autophagy modulator protein 1-like Neighboring gene piggyBac transposable element-derived protein 4-like Neighboring gene family with sequence similarity 110 member B Neighboring gene uncharacterized LOC121001464

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053393.1 Chromosome 5 Reference aBufBuf1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aBufBuf1.1

Genomic

  1. NC_053393.1 Reference aBufBuf1.1

    Range
    127176865..127221547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040432201.1 → XP_040288135.1  UBX domain-containing protein 2B isoform X2

    Conserved Domains (2) summary
    smart00553
    Location:93 → 184
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:202 → 283
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_040432200.1 → XP_040288134.1  UBX domain-containing protein 2B isoform X1

    Related
    ENSBBFP00005025561.1, ENSBBFT00005028381.1
    Conserved Domains (2) summary
    smart00553
    Location:144 → 235
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:253 → 334
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Nucleotide Protein
Heading Accession and Version

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