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RPIA ribose 5-phosphate isomerase A [ Bufo bufo (common toad) ]

Gene ID: 120990445, updated on 21-Mar-2024

Summary

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Gene symbol
RPIA
Gene description
ribose 5-phosphate isomerase A
See related
EnsemblRapid:ENSBBFG00005018561
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo bufo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See RPIA in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aBufBuf1.1 (GCF_905171765.1) 2 NC_053390.1 (795784149..795829207)

Chromosome 2 - NC_053390.1Genomic Context describing neighboring genes Neighboring gene forkhead box protein I1c-like Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 3 Neighboring gene Ig kappa chain V region Mem5-like Neighboring gene immunoglobulin kappa variable 6D-21-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053390.1 Chromosome 2 Reference aBufBuf1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribose-5-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-ribose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribose-5-phosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aBufBuf1.1

Genomic

  1. NC_053390.1 Reference aBufBuf1.1

    Range
    795784149..795829207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040419282.1 → XP_040275216.1  ribose-5-phosphate isomerase

    Related
    ENSBBFP00005025466.1, ENSBBFT00005028278.1
    Conserved Domains (1) summary
    cd01398
    Location:17 → 234
    RPI_A; Ribose 5-phosphate isomerase type A (RPI_A) subfamily; RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. This reaction leads to the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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