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COG5 component of oligomeric golgi complex 5 [ Bufo bufo (common toad) ]

Gene ID: 120982579, updated on 21-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSBBFG00005020666
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo bufo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
100 current aBufBuf1.1 (GCF_905171765.1) 1 NC_053389.1 (553493434..553907104, complement)

Chromosome 1 - NC_053389.1Genomic Context describing neighboring genes Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene G protein-coupled receptor 22 Neighboring gene dihydrouridine synthase 4 like Neighboring gene pendrin-like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053389.1 Chromosome 1 Reference aBufBuf1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aBufBuf1.1

Genomic

  1. NC_053389.1 Reference aBufBuf1.1

    Range
    553493434..553907104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040412854.1 → XP_040268788.1  conserved oligomeric Golgi complex subunit 5 isoform X4

    Related
    ENSBBFP00005027992.1, ENSBBFT00005031381.1
    Conserved Domains (1) summary
    pfam10392
    Location:42 → 164
    COG5; Golgi transport complex subunit 5

  2. XM_040412847.1 → XP_040268781.1  conserved oligomeric Golgi complex subunit 5 isoform X3

    Conserved Domains (1) summary
    pfam10392
    Location:42 → 164
    COG5; Golgi transport complex subunit 5

  3. XM_040412840.1 → XP_040268774.1  conserved oligomeric Golgi complex subunit 5 isoform X2

    Conserved Domains (1) summary
    pfam10392
    Location:42 → 164
    COG5; Golgi transport complex subunit 5

  4. XM_040412831.1 → XP_040268765.1  conserved oligomeric Golgi complex subunit 5 isoform X1

    Conserved Domains (1) summary
    pfam10392
    Location:42 → 164
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
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