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TKT transketolase [ Bufo bufo (common toad) ]

Gene ID: 120978489, updated on 21-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
EnsemblRapid:ENSBBFG00005023436
Gene type
protein coding
RefSeq status
MODEL
Organism
Bufo bufo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aBufBuf1.1 (GCF_905171765.1) 9 NC_053397.1 (38735160..38785714, complement)

Chromosome 9 - NC_053397.1Genomic Context describing neighboring genes Neighboring gene cyclic AMP-dependent transcription factor ATF-1-like Neighboring gene uncharacterized LOC120979647 Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053397.1 Chromosome 9 Reference aBufBuf1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bufo bufo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aBufBuf1.1

Genomic

  1. NC_053397.1 Reference aBufBuf1.1

    Range
    38735160..38785714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040406647.1 → XP_040262581.1  transketolase

    Related
    ENSBBFP00005031969.1, ENSBBFT00005035803.1
    Conserved Domains (1) summary
    PRK05899
    Location:8 → 619
    PRK05899; transketolase; Reviewed
Nucleotide Protein
Heading Accession and Version

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