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AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase [ Rana temporaria (common frog) ]

Gene ID: 120945778, updated on 26-Oct-2024

Summary

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Gene symbol
AGL
Gene description
amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
See related
EnsemblRapid:ENSRTEG00010010961
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See AGL in Genome Data Viewer
Location:
chromosome: 7
Exon count:
37
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 7 NC_053495.1 (153705905..153854411)

Chromosome 7 - NC_053495.1Genomic Context describing neighboring genes Neighboring gene carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like Neighboring gene butyrophilin subfamily 1 member A1-like Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1 Neighboring gene putative ferric-chelate reductase 1 Neighboring gene putative ferric-chelate reductase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053495.1 Chromosome 7 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen debranching enzyme
Names
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053495.1 Reference aRanTem1.1

    Range
    153705905..153854411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040360178.1 → XP_040216112.1  glycogen debranching enzyme isoform X1

    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1540
    glyc_debranch; glycogen debranching enzymye

  2. XM_040360177.1 → XP_040216111.1  glycogen debranching enzyme isoform X1

    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1540
    glyc_debranch; glycogen debranching enzymye

  3. XM_040360175.1 → XP_040216109.1  glycogen debranching enzyme isoform X1

    Related
    ENSRTEP00010013837.1, ENSRTET00010018587.1
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1540
    glyc_debranch; glycogen debranching enzymye

  4. XM_040360176.1 → XP_040216110.1  glycogen debranching enzyme isoform X2

    Related
    ENSRTEP00010013854.1, ENSRTET00010018610.1
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1540
    glyc_debranch; glycogen debranching enzymye

  5. XM_040360179.1 → XP_040216113.1  glycogen debranching enzyme isoform X3

    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye

  6. XM_040360180.1 → XP_040216114.1  glycogen debranching enzyme isoform X4

    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye
Nucleotide Protein
Heading Accession and Version

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