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COLGALT2 collagen beta(1-O)galactosyltransferase 2 [ Rana temporaria (common frog) ]

Gene ID: 120945548, updated on 21-Mar-2024

Summary

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Gene symbol
COLGALT2
Gene description
collagen beta(1-O)galactosyltransferase 2
See related
EnsemblRapid:ENSRTEG00010002811
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See COLGALT2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 7 NC_053495.1 (101406186..101531956, complement)

Chromosome 7 - NC_053495.1Genomic Context describing neighboring genes Neighboring gene hemicentin 1 Neighboring gene UPF0728 protein C10orf53 homolog Neighboring gene apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 Neighboring gene tRNA splicing endonuclease subunit 15 Neighboring gene chromosome 7 C1orf21 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053495.1 Chromosome 7 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053495.1 Reference aRanTem1.1

    Range
    101406186..101531956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040359797.1 → XP_040215731.1  procollagen galactosyltransferase 2

    Related
    ENSRTEP00010002066.1, ENSRTET00010003977.1
    Conserved Domains (2) summary
    cd00761
    Location:47 → 176
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    pfam01755
    Location:331 → 516
    Glyco_transf_25; Glycosyltransferase family 25 (LPS biosynthesis protein)
Nucleotide Protein
Heading Accession and Version

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