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SUMF1 sulfatase modifying factor 1 [ Rana temporaria (common frog) ]

Gene ID: 120944901, updated on 21-Mar-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
See related
EnsemblRapid:ENSRTEG00010018993
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 7 NC_053495.1 (1393903..1408322)

Chromosome 7 - NC_053495.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e40 Neighboring gene U1 spliceosomal RNA Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene proteoglycan 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053495.1 Chromosome 7 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053495.1 Reference aRanTem1.1

    Range
    1393903..1408322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040358661.1 → XP_040214595.1  formylglycine-generating enzyme

    Related
    ENSRTEP00010023261.1, ENSRTET00010031829.1
    Conserved Domains (1) summary
    COG1262
    Location:35 → 341
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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