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GPD2 glycerol-3-phosphate dehydrogenase 2 [ Rana temporaria (common frog) ]

Gene ID: 120944098, updated on 11-Apr-2024

Summary

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Gene symbol
GPD2
Gene description
glycerol-3-phosphate dehydrogenase 2
See related
EnsemblRapid:ENSRTEG00010010985
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See GPD2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
19
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 6 NC_053494.1 (183566223..183860889, complement)

Chromosome 6 - NC_053494.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 5 Neighboring gene small Cajal body-specific RNA 3 Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053494.1 Chromosome 6 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053494.1 Reference aRanTem1.1

    Range
    183566223..183860889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040357935.1 → XP_040213869.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    Related
    ENSRTEP00010013891.1, ENSRTET00010018661.1
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:9 → 598
    DAO; FAD dependent oxidoreductase

  2. XM_040357937.1 → XP_040213871.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:9 → 598
    DAO; FAD dependent oxidoreductase

  3. XM_040357936.1 → XP_040213870.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:9 → 598
    DAO; FAD dependent oxidoreductase

  4. XM_040357938.1 → XP_040213872.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2

    Related
    ENSRTEP00010013880.1, ENSRTET00010018645.1
    Conserved Domains (2) summary
    cd00051
    Location:626 → 688
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cl40741
    Location:9 → 598
    DAO; FAD dependent oxidoreductase
Nucleotide Protein
Heading Accession and Version

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