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PGM5 phosphoglucomutase 5 [ Rana temporaria (common frog) ]

Gene ID: 120943580, updated on 21-Mar-2024

Summary

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Gene symbol
PGM5
Gene description
phosphoglucomutase 5
See related
EnsemblRapid:ENSRTEG00010024275
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PGM5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 1 NC_053489.1 (288363339..288526834, complement)

Chromosome 1 - NC_053489.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene transmembrane protein 252 Neighboring gene forkhead box protein D5-A-like Neighboring gene cytochrome P450 2J2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053489.1 Chromosome 1 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglucomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in striated muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglucomutase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053489.1 Reference aRanTem1.1

    Range
    288363339..288526834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040356968.1 → XP_040212902.1  phosphoglucomutase-like protein 5 isoform X2

    Conserved Domains (1) summary
    cl38939
    Location:10 → 431
    phosphohexomutase; The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine ...

  2. XM_040356962.1 → XP_040212896.1  phosphoglucomutase-like protein 5 isoform X1

    Related
    ENSRTEP00010029018.1, ENSRTET00010040170.1
    Conserved Domains (1) summary
    cl38939
    Location:10 → 566
    phosphohexomutase; The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine ...
Nucleotide Protein
Heading Accession and Version

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