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DSEL dermatan sulfate epimerase like [ Rana temporaria (common frog) ]

Gene ID: 120940833, updated on 21-Mar-2024

Summary

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Gene symbol
DSEL
Gene description
dermatan sulfate epimerase like
See related
EnsemblRapid:ENSRTEG00010013161
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See DSEL in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 5 NC_053493.1 (282627102..282680675)

Chromosome 5 - NC_053493.1Genomic Context describing neighboring genes Neighboring gene docking protein 6 Neighboring gene thioredoxin related transmembrane protein 3 Neighboring gene cytochrome c oxidase subunit 7A-related protein, mitochondrial-like Neighboring gene cadherin-19-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053493.1 Chromosome 5 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053493.1 Reference aRanTem1.1

    Range
    282627102..282680675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040353907.1 → XP_040209841.1  dermatan-sulfate epimerase-like protein

    Related
    ENSRTEP00010016787.1, ENSRTET00010022323.1

RNA

  1. XR_005749484.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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