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SLC3A1 solute carrier family 3 member 1 [ Rana temporaria (common frog) ]

Gene ID: 120937965, updated on 21-Mar-2024

Summary

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Gene symbol
SLC3A1
Gene description
solute carrier family 3 member 1
See related
EnsemblRapid:ENSRTEG00010020263
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 4 NC_053492.1 (447319393..447385796)

Chromosome 4 - NC_053492.1Genomic Context describing neighboring genes Neighboring gene leucine rich pentatricopeptide repeat containing Neighboring gene uncharacterized LOC120937964 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene prolyl endopeptidase like Neighboring gene calmodulin-lysine N-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053492.1 Chromosome 4 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral and basic amino acid transport protein rBAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053492.1 Reference aRanTem1.1

    Range
    447319393..447385796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040351546.1 → XP_040207480.1  neutral and basic amino acid transport protein rBAT

    Related
    ENSRTEP00010024575.1, ENSRTET00010033844.1
    Conserved Domains (1) summary
    cd11359
    Location:111 → 570
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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