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GPC1 glypican 1 [ Rana temporaria (common frog) ]

Gene ID: 120936547, updated on 21-Mar-2024

Summary

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Gene symbol
GPC1
Gene description
glypican 1
See related
EnsemblRapid:ENSRTEG00010033566
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See GPC1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 4 NC_053492.1 (121860197..121978160, complement)

Chromosome 4 - NC_053492.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 28 Neighboring gene ankyrin repeat and MYND domain containing 1 Neighboring gene glypican-5-like Neighboring gene uncharacterized LOC120935319

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053492.1 Chromosome 4 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053492.1 Reference aRanTem1.1

    Range
    121860197..121978160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040348993.1 → XP_040204927.1  glypican-1

    Related
    ENSRTEP00010041968.1, ENSRTET00010056252.1
Nucleotide Protein
Heading Accession and Version

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