U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DGCR2 DiGeorge syndrome critical region gene 2 [ Rana temporaria (common frog) ]

Gene ID: 120936356, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
DGCR2
Gene description
DiGeorge syndrome critical region gene 2
See related
EnsemblRapid:ENSRTEG00010023712
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DGCR2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 1 NC_053489.1 (210587430..210668982)

Chromosome 1 - NC_053489.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene ess-2 splicing factor homolog Neighboring gene carbonic anhydrase 15-like Neighboring gene immunoglobulin lambda-1 light chain-like Neighboring gene immunoglobulin lambda-1 light chain-like Neighboring gene immunoglobulin lambda variable 5-45-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053489.1 Chromosome 1 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
integral membrane protein DGCR2/IDD

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053489.1 Reference aRanTem1.1

    Range
    210587430..210668982
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040348624.1 → XP_040204558.1  integral membrane protein DGCR2/IDD isoform X1

    Related
    ENSRTEP00010028260.1, ENSRTET00010039273.1
    Conserved Domains (3) summary
    cd03599
    Location:126 → 278
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:282 → 340
    VWC; von Willebrand factor (vWF) type C domain
    cd00112
    Location:41 → 77
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_040348633.1 → XP_040204567.1  integral membrane protein DGCR2/IDD isoform X2

    Related
    ENSRTEP00010028261.1, ENSRTET00010039274.1
    Conserved Domains (3) summary
    cd03599
    Location:115 → 267
    CLECT_DGCR2_like; C-type lectin-like domain (CTLD) of the type found in DGCR2, an integral membrane protein deleted in DiGeorge Syndrome (DGS)
    smart00214
    Location:271 → 329
    VWC; von Willebrand factor (vWF) type C domain
    cd00112
    Location:30 → 66
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.