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LOC120933692 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like [ Rana temporaria (common frog) ]

Gene ID: 120933692, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120933692
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like
See related
EnsemblRapid:ENSRTEG00010027320
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
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Genomic context

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See LOC120933692 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (482914712..482979608, complement)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene chloride channel protein ClC-Kb-like Neighboring gene POP7 homolog, ribonuclease P/MRP subunit Neighboring gene E3 ubiquitin-protein ligase Midline-1-like Neighboring gene E3 ubiquitin-protein ligase TRIM39-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    482914712..482979608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040347043.1 → XP_040202977.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like isoform X2

    Related
    ENSRTEP00010033369.1, ENSRTET00010045447.1
    Conserved Domains (1) summary
    cl21608
    Location:115 → 303
    Galactosyl_T; Galactosyltransferase

  2. XM_040347042.1 → XP_040202976.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like isoform X1

    Related
    ENSRTEP00010033363.1, ENSRTET00010045441.1
    Conserved Domains (1) summary
    cl21608
    Location:143 → 331
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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