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B4GALT7 beta-1,4-galactosyltransferase 7 [ Rana temporaria (common frog) ]

Gene ID: 120932174, updated on 21-Mar-2024

Summary

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Gene symbol
B4GALT7
Gene description
beta-1,4-galactosyltransferase 7
See related
EnsemblRapid:ENSRTEG00010026491
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See B4GALT7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (226008142..226049381, complement)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene homeobox protein EMX1-like Neighboring gene transmembrane p24 trafficking protein 9 Neighboring gene lectin, mannose binding 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    226008142..226049381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040344379.1 → XP_040200313.1  beta-1,4-galactosyltransferase 7 isoform X2

    Related
    ENSRTEP00010032198.1, ENSRTET00010044036.1
    Conserved Domains (1) summary
    cd00899
    Location:68 → 291
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_040344378.1 → XP_040200312.1  beta-1,4-galactosyltransferase 7 isoform X1

    Related
    ENSRTEP00010032197.1, ENSRTET00010044035.1
    Conserved Domains (1) summary
    cd00899
    Location:84 → 307
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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