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COG5 component of oligomeric golgi complex 5 [ Rana temporaria (common frog) ]

Gene ID: 120931775, updated on 21-Mar-2024

Summary

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Gene symbol
COG5
Gene description
component of oligomeric golgi complex 5
See related
EnsemblRapid:ENSRTEG00010033696
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See COG5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (141483347..141963381, complement)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene protein kinase cAMP-dependent type II regulatory subunit beta Neighboring gene HMG-box transcription factor 1 Neighboring gene G protein-coupled receptor 22 Neighboring gene pendrin-like Neighboring gene dihydrouridine synthase 4 like Neighboring gene B cell receptor associated protein 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    141483347..141963381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040343536.1 → XP_040199470.1  conserved oligomeric Golgi complex subunit 5

    Related
    ENSRTEP00010042159.1, ENSRTET00010056487.1
    Conserved Domains (2) summary
    pfam10392
    Location:39 → 161
    COG5; Golgi transport complex subunit 5
    TIGR02168
    Location:57 → 269
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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