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CSPG4 chondroitin sulfate proteoglycan 4 [ Rana temporaria (common frog) ]

Gene ID: 120931487, updated on 21-Mar-2024

Summary

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Gene symbol
CSPG4
Gene description
chondroitin sulfate proteoglycan 4
See related
EnsemblRapid:ENSRTEG00010026339
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See CSPG4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (92916154..93080019, complement)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene snurportin 1 Neighboring gene sorting nexin 33 Neighboring gene uncharacterized LOC120930301 Neighboring gene 40S ribosomal protein S28-like Neighboring gene leucine rich repeat and Ig domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
chondroitin sulfate proteoglycan 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    92916154..93080019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040342989.1 → XP_040198923.1  chondroitin sulfate proteoglycan 4

    Related
    ENSRTEP00010032044.1, ENSRTET00010043803.1
    Conserved Domains (2) summary
    smart00282
    Location:40 → 168
    LamG; Laminin G domain
    cd00110
    Location:199 → 359
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

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