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CHSY1 chondroitin sulfate synthase 1 [ Rana temporaria (common frog) ]

Gene ID: 120931142, updated on 21-Mar-2024

Summary

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Gene symbol
CHSY1
Gene description
chondroitin sulfate synthase 1
See related
EnsemblRapid:ENSRTEG00010025938
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See CHSY1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (17208150..17279024)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein polypeptide A' Neighboring gene selenoprotein S Neighboring gene leucine rich repeat kinase 1 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC120931144

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    17208150..17279024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040342318.1 → XP_040198252.1  chondroitin sulfate synthase 1

    Related
    ENSRTEP00010031457.1, ENSRTET00010043078.1
    Conserved Domains (1) summary
    cl21608
    Location:96 → 317
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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