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SFRP1 secreted frizzled related protein 1 [ Rana temporaria (common frog) ]

Gene ID: 120930519, updated on 21-Mar-2024

Summary

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Gene symbol
SFRP1
Gene description
secreted frizzled related protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See SFRP1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 3 NC_053491.1 (412400167..412457786, complement)

Chromosome 3 - NC_053491.1Genomic Context describing neighboring genes Neighboring gene indoleamine 2,3-dioxygenase 2 Neighboring gene transcriptional and immune response regulator Neighboring gene U2 spliceosomal RNA Neighboring gene serine protease 23-like Neighboring gene transfer RNA aspartic acid (anticodon AUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053491.1 Chromosome 3 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053491.1 Reference aRanTem1.1

    Range
    412400167..412457786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040341696.1 → XP_040197630.1  LOW QUALITY PROTEIN: secreted frizzled-related protein 1

    Conserved Domains (2) summary
    cd03580
    Location:300 → 423
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    cl02447
    Location:171 → 292
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
Nucleotide Protein
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