U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACOD1 aconitate decarboxylase 1 [ Rana temporaria (common frog) ]

Gene ID: 120929693, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
EnsemblRapid:ENSRTEG00010016279
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACOD1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 2 NC_053490.1 (170360850..170372827, complement)

Chromosome 2 - NC_053490.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-associated protein 6-like Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene uncharacterized LOC120929695 Neighboring gene CLN5 intracellular trafficking protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_053490.1 Chromosome 2 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053490.1 Reference aRanTem1.1

    Range
    170360850..170372827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040341391.1 → XP_040197325.1  cis-aconitate decarboxylase

    Related
    ENSRTEP00010020793.1, ENSRTET00010027644.1
    Conserved Domains (1) summary
    cl00912
    Location:16 → 448
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.