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PCYT1B phosphate cytidylyltransferase 1B, choline [ Rana temporaria (common frog) ]

Gene ID: 120927495, updated on 21-Mar-2024

Summary

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Gene symbol
PCYT1B
Gene description
phosphate cytidylyltransferase 1B, choline
See related
EnsemblRapid:ENSRTEG00010021597
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PCYT1B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 2 NC_053490.1 (420211185..420318972)

Chromosome 2 - NC_053490.1Genomic Context describing neighboring genes Neighboring gene aristaless related homeobox Neighboring gene DNA polymerase alpha 1, catalytic subunit Neighboring gene uncharacterized LOC120927494 Neighboring gene pyruvate dehydrogenase kinase 3 Neighboring gene organic solute transporter subunit alpha-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053490.1 Chromosome 2 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053490.1 Reference aRanTem1.1

    Range
    420211185..420318972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040338206.1 → XP_040194140.1  choline-phosphate cytidylyltransferase B isoform X1

    Related
    ENSRTEP00010025713.1, ENSRTET00010035778.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 293
    PLN02413; choline-phosphate cytidylyltransferase

  2. XM_040338207.1 → XP_040194141.1  choline-phosphate cytidylyltransferase B isoform X2

    Conserved Domains (1) summary
    PLN02413
    Location:72 → 293
    PLN02413; choline-phosphate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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