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ACACA acetyl-CoA carboxylase alpha [ Rana temporaria (common frog) ]

Gene ID: 120927266, updated on 21-Mar-2024

Summary

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Gene symbol
ACACA
Gene description
acetyl-CoA carboxylase alpha
See related
EnsemblRapid:ENSRTEG00010025692
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See ACACA in Genome Data Viewer
Location:
chromosome: 2
Exon count:
55
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 2 NC_053490.1 (375987936..376498270)

Chromosome 2 - NC_053490.1Genomic Context describing neighboring genes Neighboring gene synergin gamma Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene transcriptional adaptor 2A Neighboring gene uncharacterized LOC120927267 Neighboring gene apoptosis antagonizing transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053490.1 Chromosome 2 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-CoA carboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053490.1 Reference aRanTem1.1

    Range
    375987936..376498270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040337823.1 → XP_040193757.1  acetyl-CoA carboxylase 1 isoform X2

    Related
    ENSRTEP00010031116.1, ENSRTET00010042631.1
    Conserved Domains (4) summary
    cd06850
    Location:754 → 818
    biotinyl_domain; The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, ...
    COG0439
    Location:118 → 620
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:671 → 818
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    cl40687
    Location:1656 → 2210
    Carboxyl_trans; Carboxyl transferase domain

  2. XM_040337822.1 → XP_040193756.1  acetyl-CoA carboxylase 1 isoform X1

    Conserved Domains (4) summary
    cd06850
    Location:785 → 849
    biotinyl_domain; The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, ...
    COG0439
    Location:149 → 651
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:702 → 849
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    cl40687
    Location:1687 → 2241
    Carboxyl_trans; Carboxyl transferase domain

  3. XM_040337824.1 → XP_040193758.1  acetyl-CoA carboxylase 1 isoform X3

    Conserved Domains (4) summary
    cd06850
    Location:676 → 740
    biotinyl_domain; The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, ...
    COG0439
    Location:40 → 542
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    COG0511
    Location:593 → 740
    AccB; Biotin carboxyl carrier protein [Coenzyme transport and metabolism, Lipid transport and metabolism]
    cl40687
    Location:1578 → 2132
    Carboxyl_trans; Carboxyl transferase domain
Nucleotide Protein
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