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ACSL1 acyl-CoA synthetase long chain family member 1 [ Rana temporaria (common frog) ]

Gene ID: 120921574, updated on 21-Mar-2024

Summary

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Gene symbol
ACSL1
Gene description
acyl-CoA synthetase long chain family member 1
See related
EnsemblRapid:ENSRTEG00010016532
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See ACSL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 1 NC_053489.1 (561441015..561554044, complement)

Chromosome 1 - NC_053489.1Genomic Context describing neighboring genes Neighboring gene primase and DNA directed polymerase Neighboring gene caspase-3-like Neighboring gene centromere protein U Neighboring gene E3 SUMO-protein ligase ZBED1-like Neighboring gene helt bHLH transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053489.1 Chromosome 1 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053489.1 Reference aRanTem1.1

    Range
    561441015..561554044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040334098.1 → XP_040190032.1  long-chain-fatty-acid--CoA ligase 1 isoform X2

    Related
    ENSRTEP00010021081.1, ENSRTET00010028086.1
    Conserved Domains (1) summary
    cd05927
    Location:116 → 694
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_040334075.1 → XP_040190009.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    Related
    ENSRTEP00010021069.1, ENSRTET00010028071.1
    Conserved Domains (1) summary
    cd05927
    Location:116 → 694
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_040334083.1 → XP_040190017.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    Conserved Domains (1) summary
    cd05927
    Location:116 → 694
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_040334091.1 → XP_040190025.1  long-chain-fatty-acid--CoA ligase 1 isoform X1

    Conserved Domains (1) summary
    cd05927
    Location:116 → 694
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
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