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GANC glucosidase alpha, neutral C [ Rana temporaria (common frog) ]

Gene ID: 120920982, updated on 21-Mar-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
See related
EnsemblRapid:ENSRTEG00010005037
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 13
Exon count:
27
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 13 NC_053501.1 (67881495..68010959, complement)

Chromosome 13 - NC_053501.1Genomic Context describing neighboring genes Neighboring gene egl-9 family hypoxia inducible factor 3 Neighboring gene serine palmitoyltransferase small subunit A Neighboring gene SEC23 homolog A, COPII coat complex component Neighboring gene rhodopsin, GQ-coupled-like Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053501.1 Chromosome 13 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053501.1 Reference aRanTem1.1

    Range
    67881495..68010959 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040333499.1 → XP_040189433.1  neutral alpha-glucosidase C isoform X4

    Conserved Domains (2) summary
    cd06603
    Location:358 → 825
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:218 → 358
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_040333497.1 → XP_040189431.1  neutral alpha-glucosidase C isoform X3

    Related
    ENSRTEP00010005098.1, ENSRTET00010007863.1
    Conserved Domains (2) summary
    cd06603
    Location:359 → 826
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:219 → 359
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  3. XM_040333496.1 → XP_040189430.1  neutral alpha-glucosidase C isoform X2

    Conserved Domains (2) summary
    cd06603
    Location:381 → 848
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:241 → 381
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  4. XM_040333494.1 → XP_040189428.1  neutral alpha-glucosidase C isoform X1

    Related
    ENSRTEP00010005101.1, ENSRTET00010007866.1
    Conserved Domains (2) summary
    cd06603
    Location:382 → 849
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:242 → 382
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  5. XM_040333495.1 → XP_040189429.1  neutral alpha-glucosidase C isoform X1

    Related
    ENSRTEP00010005088.1, ENSRTET00010007845.1
    Conserved Domains (2) summary
    cd06603
    Location:382 → 849
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:242 → 382
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
Nucleotide Protein
Heading Accession and Version

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