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ACLY ATP citrate lyase [ Rana temporaria (common frog) ]

Gene ID: 120919493, updated on 21-Mar-2024

Summary

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Gene symbol
ACLY
Gene description
ATP citrate lyase
See related
EnsemblRapid:ENSRTEG00010011011
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See ACLY in Genome Data Viewer
Location:
chromosome: 12
Exon count:
29
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 12 NC_053500.1 (70788071..70925221, complement)

Chromosome 12 - NC_053500.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120918239 Neighboring gene uncharacterized LOC120918666 Neighboring gene uncharacterized LOC120919500 Neighboring gene uncharacterized LOC120918205

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053500.1 Chromosome 12 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP citrate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-citrate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053500.1 Reference aRanTem1.1

    Range
    70788071..70925221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040331686.1 → XP_040187620.1  ATP-citrate synthase isoform X1

    Related
    ENSRTEP00010014064.1, ENSRTET00010018849.1
    Conserved Domains (2) summary
    PLN02522
    Location:491 → 1094
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding

  2. XM_040331687.1 → XP_040187621.1  ATP-citrate synthase isoform X2

    Related
    ENSRTEP00010014070.1, ENSRTET00010018855.1
    Conserved Domains (2) summary
    PLN02522
    Location:481 → 1084
    PLN02522; ATP citrate (pro-S)-lyase
    cl29684
    Location:1 → 419
    Citrate_bind; ATP citrate lyase citrate-binding
Nucleotide Protein
Heading Accession and Version

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