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POFUT1 protein O-fucosyltransferase 1 [ Rana temporaria (common frog) ]

Gene ID: 120919433, updated on 21-Mar-2024

Summary

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Gene symbol
POFUT1
Gene description
protein O-fucosyltransferase 1
See related
EnsemblRapid:ENSRTEG00010015976
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See POFUT1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 12 NC_053500.1 (12376736..12395249, complement)

Chromosome 12 - NC_053500.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 3B Neighboring gene uncharacterized LOC120919434 Neighboring gene PLAG1 like zinc finger 2 Neighboring gene uncharacterized LOC120918445

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053500.1 Chromosome 12 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053500.1 Reference aRanTem1.1

    Range
    12376736..12395249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040331599.1 → XP_040187533.1  GDP-fucose protein O-fucosyltransferase 1

    Related
    ENSRTEP00010020406.1, ENSRTET00010027109.1
    Conserved Domains (1) summary
    cd11302
    Location:37 → 385
    O-FucT-1; GDP-fucose protein O-fucosyltransferase 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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