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PTGIS prostaglandin I2 synthase [ Rana temporaria (common frog) ]

Gene ID: 120918948, updated on 21-Mar-2024

Summary

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Gene symbol
PTGIS
Gene description
prostaglandin I2 synthase
See related
EnsemblRapid:ENSRTEG00010018820
Gene type
protein coding
RefSeq status
MODEL
Organism
Rana temporaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae; Rana; Rana
Orthologs
human mouse all
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Genomic context

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See PTGIS in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aRanTem1.1 (GCF_905171775.1) 12 NC_053500.1 (135843086..135871108)

Chromosome 12 - NC_053500.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-galactosyltransferase 5 Neighboring gene cytoplasmic polyadenylation element-binding protein 1-B-like Neighboring gene potassium voltage-gated channel subfamily B member 1 Neighboring gene uncharacterized LOC120918949 Neighboring gene small nucleolar SNORD12/SNORD106

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053500.1 Chromosome 12 Reference aRanTem1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-I synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostacyclin synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rana temporaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRanTem1.1

Genomic

  1. NC_053500.1 Reference aRanTem1.1

    Range
    135843086..135871108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040330859.1 → XP_040186793.1  prostacyclin synthase isoform X1

    Related
    ENSRTEP00010023153.1, ENSRTET00010031583.1
    Conserved Domains (1) summary
    cl12078
    Location:259 → 464
    p450; Cytochrome P450

  2. XM_040330860.1 → XP_040186794.1  prostacyclin synthase isoform X2

    Conserved Domains (1) summary
    cl12078
    Location:259 → 396
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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